Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015833252.1_cds_XP_016505163.1_18529
CDS Infomation

[gene=LOC107823081] [db_xref=GeneID:107823081] [protein=RING-H2 finger protein ATL13-like] [protein_id=XP_016505163.1] [location=41125..42630] [gbkey=CDS]
Sequence

ATGAGTTGGGTTTTTGTTAAAATTCAAGAAAGTAGTGTTCTTTCTCCCTCAAATCAGCCA
CTTTTCCTCCTTCAACCACCACCACCACCCTTAACACCATTTTCTACACATGATTCTAGT
GGTAGTAGTGGCGGTCTTTTCAATTTGAATAACAAAGTAAGCCCAAGTATACTTCTTGTT
ATCATAATTCTTGCAATTATCTTCTTCATTTCTGGTTTACTTCACTTACTTGTTAGATTT
TTATTAAGGCCAACAAATAGAGATCCAGATGAATTAGACAATGTAACAGCACTTCAAGGT
CAATTACAGCAACTTTTTCACTTACATGATTCTGGTGTAGATCAATCTTTTATTGATACA
CTTCCTGTTTTCAATTACAAAGCAATTATTGGTGTCAAAGACCCTTTTGATTGTGCTGTT
TGTTTGTGTGAATTTGAGCCAGAAGATAAGCTTAGATTACTCCCTAAATGTAGCCATGCT
TTTCATATGGAGTGTATTGACACTTGGCTTTTGTCTCATTCAACTTGTCCTCTTTGTAGA
GCTAGTTTATTGCCTGATTTCTCTTCATCAAATAACAACCATAGTTGTTCTCCTATTGTC
TTTGTTCTTGAATCTGGAAGTGAAAGTTCAAGGGAAAATATTGTTCAAAATAGTCATGAA
TTTGGATCATTGAGAAGGAATAATTCAATTTCAAGACTAAGTTTAAGTTCCCATTTTGAG
GAAATTAATGTCTCAGATATTGTTGTGGCAAAAACTTGTGATGAAATCAAAGGAAAAGAA
GAGGAAGTTGAAAAAGTTGTACAAGTGAAATTAGGAAAATTCAAGAATGTGGAGCCACAA
GAAAGTGAAGAAGGAAGTAGTAATAATATTGATTCAAGAAGATGTTTTTCAATGGGATCA
TTTGCTTATGTTTTAGATGAAACTACAGCTTTACATGTTCCTATTAGAAAAACACCCTCA
AAAAAGAGTTCAAACAAGAAGCCAAATTTGCCACCTTTGACACCAGGTCATAGACAAGCA
ATGTCTGAATGTGGATGTGATTCAAGAAGGGAATTCAATGGATTTGAGGGATTCAAATTT
GCTGAAAATTCCATGCAAAACAACATTCATGTCAATGAAAACAAGATTCTTGAAAATGGG
AGTTGTAAAAGAGAGAGCTTTTCAATTTCCAAGATTTGGTTAAGGGGAAAAAAGGATGAA
AATAACAATTCAAGAAGGGCTTTTTCTTTCCGGTTTCCGGTTAGCCGGAATATTCCAGTC
ACGGCGGTTCCAGGCGGCTCCGCCGCGACCAAGAATGGTAGTGGTGGTGGTGGTGGCAGT
AGGAGGACTATTTCAGAGATTGATATTGGTACATGGGAAAATAATGGAGGATGTGATGAA
GAAAATCAATGCTACAATAGATTGGAATTTCAACCAAAAACTCCATCTTTTGCAAGGAGA
ACACTTCTTTGGCTTATGGGAAAACAAAACAAAGTTATACACTCTTCTTTCTCATCAAAT
CTCTAG

Peptide Sequence

PEP ID

XP_016505163.1
PEP Infomation

PREDICTED: RING-H2 finger protein ATL13-like [Nicotiana tabacum]
Sequence

MSWVFVKIQESSVLSPSNQPLFLLQPPPPPLTPFSTHDSSGSSGGLFNLNNKVSPSILLV
IIILAIIFFISGLLHLLVRFLLRPTNRDPDELDNVTALQGQLQQLFHLHDSGVDQSFIDT
LPVFNYKAIIGVKDPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCR
ASLLPDFSSSNNNHSCSPIVFVLESGSESSRENIVQNSHEFGSLRRNNSISRLSLSSHFE
EINVSDIVVAKTCDEIKGKEEEVEKVVQVKLGKFKNVEPQESEEGSSNNIDSRRCFSMGS
FAYVLDETTALHVPIRKTPSKKSSNKKPNLPPLTPGHRQAMSECGCDSRREFNGFEGFKF
AENSMQNNIHVNENKILENGSCKRESFSISKIWLRGKKDENNNSRRAFSFRFPVSRNIPV
TAVPGGSAATKNGSGGGGGSRRTISEIDIGTWENNGGCDEENQCYNRLEFQPKTPSFARR
TLLWLMGKQNKVIHSSFSSNL

Transcript Sequence

Gene sequence data has not been registered.